Differential expression analysis

This tutorial covers normalization, dispersion estimation, statistical testing, filtering and multiple testing correction. The materials are available at https://chipster.csc.fi/manual/course... We have added some clarifications on (log) fold change and other statistical testing related terms here: https://chipster.rahtiapp.fi/manual/s... 04:02 Normalization 08:02 FPKM method and why you should use raw values 12:20 Dispersion estimation 17:33 Statistical testing (generalized linear models, edgeR, DESeq2) 21:30 Multiple testing correction 23:20 Filtering 24:43 DESeq2 result table