Bioinformatics for Beginners | Antimicrobial Resistance Genes Detection using ABRicate tutorial

Whole Genome Analysis | Identifying antimicrobial resistance genes in your genomes using ABRicate AMR identification *Thank me with a Coffee*: https://www.buymeacoffee.com/informat... *Tip me on Paypal*: https://www.paypal.com/paypalme/thein... *One-on-One coaching*: https://calendly.com/bioinformaticscoach *Consultation: https://calendly.com/bioinformaticscoach Reach out bioinformaticscoach@gmail.com Get more bioinformatics tutorials on Patreon:   / bigdataanalytics   Materials ______________________________ Where to download ABRicate software https://github.com/tseemann/abricate Dataset can be downloaded from any of the links below https://swift.rc.nectar.org.au:8888/v... https://github.com/vappiah/bioinfodat... https://github.com/vappiah/bioinfodata How to install anaconda Linux    • Install , Configure and Run Anaconda in  a...   MacOS    • How to Install and Run Anaconda in  MacOS ...   - GUI Installer    • Install, Configure and Run Anaconda in ANY...   - Command line installer Genome visualization using DNAPlotter    • Artemis Tutorial | Genome Visualization us...   Where to search for information about the AMR genes in NCBI https://www.ncbi.nlm.nih.gov/gene Chapters 00:56 What is antimicrobial resistance 01:18 Examples of antimicrobial agents 01:09 Tools for identification of AMR genes 02:28 Lab Session 02:28 PC Requirement 03:03 Add conda channels 04:00 Create environment and install ABRicate software 05:54 Activate conda environment 06:23 Download example data 07:10 Set working directory 07:31 Test ABRicate software 08:42 Run ABRicate on the data 10:41 View and interpretation of output 15:36 Obtain additional information about the hit genes in NCBI database Antibiotic resistance detection | Abricate tutorial | How to identify Antimicrobial Resistance Genes #Bioinformatics #Linux #DataScience #bioinformatics #bioinformaticsforbeginners #bioinformática #genomics #genome #genomesequencing #bacterial #microbiology #linuxforbeginners #linuxforbioinformatics #bacterialdisease