SYNB1 - Methods in Computational Protein Design

Part of Canadian Synthetic Biology Education Research Group (CSBERG)'s summer workshops on synthetic biology. Timestamps: 9:19 - Classical method 15:53 - Rosetta design 20:38 - Machine learning for protein design 27:05 - Exploring latent space 35:26 - Sequence to function model 36:46 - Transfer learning 39:06 - Exploration exploitation tradeoff 40:18 - Active learning 46:19 - Distributed bio 47:57 - Ginkgo bioworks VMD Demo:    • VMD Demo   Musical latent space: https://experiments.withgoogle.com/ai... BigGAN Interpolations (based on Jimmy Ba's CSC413 assignment): https://colab.research.google.com/dri...