Lecture 20 | Pan-Genome Analysis Using BPGA | Comparative Genomics Beginners | @SciChatMindset
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Lecture 20 | Pan-Genome Analysis Using BPGA | Comparative Genomics Beginners | @SciChatMindset
483 просмотра · 1 г. назад
SciChat Mindset
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483 просмотра · 1 г. назад
🧬 Lecture 20 | Pan-Genome Analysis Using BPGA Tool | Comparative Genomics for Beginners
Welcome to SciChat Mindset! In this tutorial, we dive into BPGA (Bacterial Pan Genome Analysis) – a powerful tool for performing comparative genomic analysis of multiple bacterial strains.
🔍 What you'll learn in this video:
What is pan-genome and its biological relevance
How to prepare your input data (FASTA files of multiple genomes)
Step-by-step guide on running BPGA tool
Interpreting core, accessory, and unique genes
Generating phylogenetic trees, COG, and pathway analysis
🌐 This session is perfect for beginners in microbial genomics, metagenomics, and bioinformatics research – especially those working with metal-resistant bacteria.
💻 Tool Used: BPGA (Linux-based tool demonstrated clearly for easy understanding)
📁 Sample input data and results interpretation included!
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#BPGA #PanGenome #ComparativeGenomics #MicrobialGenomics #Bioinformatics #GenomeAnalysis #MetalResistantBacteria #CoreGenome #AccessoryGenes #SciChatMindset #Microbiology #NGSAnalysis #EnvironmentalMicrobiology #scienceeducation