Demo: Exploring a SARS-CoV-2 build in Auspice
Nextstrain
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Demo: Exploring a SARS-CoV-2 build in Auspice
2 201 просмотр · 5 лет назад
Nextstrain
567 подписчиков
2 201 просмотр · 5 лет назад
In this video, we demonstrate how to use Auspice to explore a SARS-CoV-2 Nextstrain build. Features shown include:
Viewing a build through Nextstrain Community
Using filter & color by options to identify introductions of the virus into a region of interest
Navigating the phylogenetic tree
Dragging & dropping additional metadata onto the tree
Downloading the metadata or .nwk/.nexus tree
Changing tip labels & branch labels
Coloring the tree by genotype
Using scatter view to identify rapidly growing variants in a region of interest